296 10 20655 https://www.socictopen.socict.org/files/original/9c0865ad5673ddcbc70c7a40e99e0632.pdf ef741b736dd3b46e44b875573a4429cc Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus infections in hospitalized pediatric patients with acute respiratory tract disease Creator An entity primarily responsible for making the resource Lusa Lara, Petrovec Miroslav, Krivec Uros, Jevšnik Monika, Uršič Tina, Žigon Nina Description An account of the resource Abstract Background Acute viral respiratory infections are an important cause of morbidity and mortality in humans worldwide. The etiological backgrounds of these infections remain unconfirmed in most clinical cases. The aim of this study was to estimate the prevalence of human coronavirus infections in a series of children hospitalized with symptoms of acute respiratory tract disease in a one-year period in Slovenia. Methods The 664 specimens from 592 children under six years of age hospitalized at the University Children’s Hospital in Ljubljana were sent for the routine laboratory detection of respiratory viruses. Respiratory viruses were detected with a direct immunofluorescence assay and human coronaviruses were detected with a modified real-time RT–PCR. Results HCoV RNA was detected in 40 (6%, 95% CI: 4.3%–8.1%) of 664 samples. Of these specimens, 21/40 (52.5%) were identified as species HKU1, 7/40 (17.5%) as OC43, 6/40 (15%) as 229E, and 6/40 (15%) as NL63. Infection with HCoV occurred as a coinfection with one or more other viruses in most samples (70%). Of the HCoV-positive children, 70.3% had lower respiratory tract infections. Conclusion The results of our study show that HCoV are frequently detected human pathogens, often associated with other respiratory viruses and acute respiratory tract infections in hospitalized children. An association between age and the viral load was found. The highest viral load was detected in children approximately 10 months of age. Date A point or period of time associated with an event in the lifecycle of the resource 2012 Subject The topic of the resource human coronavirus, Hospitalized children, respiratory viral infection Identifier An unambiguous reference to the resource within a given context DOI: 10.1186/1471-2334-12-365 Source A related resource from which the described resource is derived BMC Infectious Diseases Publisher An entity responsible for making the resource available BMC Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases https://www.socictopen.socict.org/files/original/05f135eeafd3d1dfa590a7c82dedac4e.pdf 4a6cb491a97d0355a6b6ad4142e099d5 Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Porcine Coronavirus HKU15 Detected in 9 US States, 2014 Creator An entity primarily responsible for making the resource Yan Zhang, Leyi Wang, Beverly Byrum Date A point or period of time associated with an event in the lifecycle of the resource 2014 Subject The topic of the resource United States, Coronaviridae, deltacoronavirus, porcine coronavirus, Deltacoronavirus genus, HKU15 Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid2009.140756 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine https://www.socictopen.socict.org/files/original/cb3fc47e918ad164afd1706a2d54de91.pdf dc7ede06607abb330d3ce71b56b12e5a Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Molecular Epidemiology of Hospital Outbreak of Middle East Respiratory Syndrome, Riyadh, Saudi Arabia, 2014 Creator An entity primarily responsible for making the resource Musa A. Garbati, Leila Skakni, Daniel K.W. Chu, Ahmed M. Hakawi, Shamsudeen F. Fagbo, Mercy Joseph Description An account of the resource We investigated an outbreak of Middle East respiratory syndrome (MERS) at King Fahad Medical City (KFMC), Riyadh, Saudi Arabia, during March 29–May 21, 2014. This outbreak involved 45 patients: 8 infected outside KFMC, 13 long-term patients at KFMC, 23 health care workers, and 1 who had an indeterminate source of infection. Sequences of full-length MERS coronavirus (MERS-CoV) from 10 patients and a partial sequence of MERS-CoV from another patient, when compared with other MERS-CoV sequences, demonstrated that this outbreak was part of a larger outbreak that affected multiple health care facilities in Riyadh and possibly arose from a single zoonotic transmission event that occurred in December 2013 (95% highest posterior density interval November 8, 2013–February 10, 2014). This finding suggested continued health care–associated transmission for 5 months. Molecular epidemiology documented multiple external introductions in a seemingly contiguous outbreak and helped support or refute transmission pathways suspected through epidemiologic investigation. Date A point or period of time associated with an event in the lifecycle of the resource 2015 Subject The topic of the resource Viruses, coronavirus, MERS-CoV, Middle East respiratory syndrome, MERS, Middle East respiratory syndrome coronavirus Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid2111.150944 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine https://www.socictopen.socict.org/files/original/1dcce470f7b844a9e09eb473bd338c7b.pdf 7e1613a035c588d98f9d872b95117a28 Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Detection and Phylogenetic Analysis of Group 1 Coronaviruses in South American Bats Creator An entity primarily responsible for making the resource Christine VF Carrington, Abiodun A Adesiyun, Jinxia Zhang, Gavin JD Smith, Yi Guan, Albert J Auguste, Jerome E Foster, Huachen Zhu, Nadin Thompson, Vernie Ramkissoon Description An account of the resource Bat coronaviruses (Bt-CoVs) are thought to be the precursors of severe acute respiratory syndrome coronavirus. We detected Bt-CoVs in 2 bat species from Trinidad. Phylogenetic analysis of the RNA-dependent RNA polymerase gene and helicase confirmed them as group 1 coronaviruses. Date A point or period of time associated with an event in the lifecycle of the resource 2008 Subject The topic of the resource South America, coronavirus, dispatch, bat, Trinidad, Bt-CoV Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid1412.080642 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine https://www.socictopen.socict.org/files/original/a7c8da5abe70969e8cd1e832371c6c3f.pdf 0ca3d41bd45f1980b0d53d43a251eb04 Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Viral RNA in Blood as Indicator of Severe Outcome in Middle East Respiratory Syndrome Coronavirus Infection Creator An entity primarily responsible for making the resource Seung-Jun Lee, Moon-Woo Seong, Sung Sup Park, Jeong-Sun Yang, So-Yeon Kim, Sung Soon Kim, Ga-Yeon Kim, Hyeon-Gun Jee, Sun-Jae Park, Jeesoo Lee, Ran-hui Cha, Yu Mi Jung, Sung Im Cho, Man Jin Kim, Soo Hyun Seo, Yeonjae Kim, Hyoung-Shik Shin, Sook Young Cho Description An account of the resource We evaluated the diagnostic and clinical usefulness of blood specimens to detect Middle East respiratory syndrome coronavirus infection in 21 patients from the 2015 outbreak in South Korea. Viral RNA was detected in blood from 33% of patients at initial diagnosis, and the detection preceded a worse clinical course. Date A point or period of time associated with an event in the lifecycle of the resource 2016 Subject The topic of the resource real-time PCR, Prognosis, Blood, Viruses, coronavirus, Middle East respiratory syndrome Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid2210.160218 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine https://www.socictopen.socict.org/files/original/c9386703424f7bc04c17bcd66cbd7695.pdf b1439a5d1958bba465c7873c62d282e6 Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Livestock Susceptibility to Infection with Middle East Respiratory Syndrome Coronavirus Creator An entity primarily responsible for making the resource Bart L. Haagmans, Marta Muñoz, Judith M.A. van den Brand, Júlia Vergara-Alert, Albert Bensaid, Joaquim Segalés, W. Widagdo, Debby Schipper, David Solanes, Stalin Raj, Ivan Cordón Description An account of the resource Middle East respiratory syndrome (MERS) cases continue to be reported, predominantly in Saudi Arabia and occasionally other countries. Although dromedaries are the main reservoir, other animal species might be susceptible to MERS coronavirus (MERS-CoV) infection and potentially serve as reservoirs. To determine whether other animals are potential reservoirs, we inoculated MERS-CoV into llamas, pigs, sheep, and horses and collected nasal and rectal swab samples at various times. The presence of MERS-CoV in the nose of pigs and llamas was confirmed by PCR, titration of infectious virus, immunohistochemistry, and in situ hybridization; seroconversion was detected in animals of both species. Conversely, in sheep and horses, virus-specific antibodies did not develop and no evidence of viral replication in the upper respiratory tract was found. These results prove the susceptibility of llamas and pigs to MERS-CoV infection. Thus, the possibility of MERS-CoV circulation in animals other than dromedaries, such as llamas and pigs, is not negligible. Date A point or period of time associated with an event in the lifecycle of the resource 2017 Subject The topic of the resource livestock, pig, coronavirus, MERS-CoV, Middle East respiratory syndrome, MERS Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid2302.161239 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine https://www.socictopen.socict.org/files/original/9db9e12a5d6712002889593e7fe888a7.pdf 5706f8db7c5d737f2f18a4701180f5a3 Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Full-Genome Deep Sequencing and Phylogenetic Analysis of Novel Human Betacoronavirus Creator An entity primarily responsible for making the resource Paul Kellam, Matthew Cotten, Andrew Rambaut, Oliver G. Pybus, Yi Guan, Eleni Nastouli, Tommy T. Lam, Deenan Pillay, Velislava Petrova, Simon J. Watson, Anne L. Palser, Paul Grant Description An account of the resource A novel betacoronavirus associated with lethal respiratory and renal complications was recently identified in patients from several countries in the Middle East. We report the deep genome sequencing of the virus directly from a patient’s sputum sample. Our high-throughput sequencing yielded a substantial depth of genome sequence assembly and showed the minority viral variants in the specimen. Detailed phylogenetic analysis of the virus genome (England/Qatar/2012) revealed its close relationship to European bat coronaviruses circulating among the bat species of the Vespertilionidae family. Molecular clock analysis showed that the 2 human infections of this betacoronavirus in June 2012 (EMC/2012) and September 2012 (England/Qatar/2012) share a common virus ancestor most likely considerably before early 2012, suggesting the human diversity is the result of multiple zoonotic events. Date A point or period of time associated with an event in the lifecycle of the resource 2013 Subject The topic of the resource evolution, Respiratory tract infections, disease transmission, Molecular, Infectious, coronavirus infections Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid1905.130057 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine https://www.socictopen.socict.org/files/original/437763cc347fca15ea16c7d0a405b05c.pdf f446664215c8922ba17bfd53f50f3193 Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Public Health Lessons from Severe Acute Respiratory Syndrome a Decade Later Creator An entity primarily responsible for making the resource WANG Yu, Jeffrey P. Koplan, Thomas Tsang, David Butler-Jones Description An account of the resource The outbreak of severe acute respiratory syndrome in 2002–2003 exacted considerable human and economic costs from countries involved. It also exposed major weaknesses in several of these countries in coping with an outbreak of a newly emerged infectious disease. In the 10 years since the outbreak, in addition to the increase in knowledge of the biology and epidemiology of this disease, a major lesson learned is the value of having a national public health institute that is prepared to control disease outbreaks and designed to coordinate a national response and assist localities in their responses. Date A point or period of time associated with an event in the lifecycle of the resource 2013 Subject The topic of the resource Public Health, Viruses, coronavirus, severe acute respiratory syndrome, SARS, disease threats Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid1906.121426 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine https://www.socictopen.socict.org/files/original/6055f6b17412166b2810129d305ffac6.pdf d4929240bb3081670eda7bd1a7bcb0fa Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource World Health Organization Global Conference on Severe Acute Respiratory Syndrome Creator An entity primarily responsible for making the resource David Bell, Julie Hall, Philip Jenkins Date A point or period of time associated with an event in the lifecycle of the resource 2003 Subject The topic of the resource Malaysia Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid0909.030559 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine https://www.socictopen.socict.org/files/original/8c9ec54b365aa5daef7503171a42caaa.pdf fbabd383eee01ae0468991cf2f00ab41 Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Coronavirus Description An account of the resource Dominio científico: Coronavirus Text A resource consisting primarily of words for reading. Examples include books, letters, dissertations, poems, newspapers, articles, archives of mailing lists. Note that facsimiles or images of texts are still of the genre Text. Dublin Core The Dublin Core metadata element set is common to all Omeka records, including items, files, and collections. For more information see, http://dublincore.org/documents/dces/. Title A name given to the resource Long-term Psychological and Occupational Effects of Providing Hospital Healthcare during SARS Outbreak Creator An entity primarily responsible for making the resource Thomas E Stewart, Sean B Rourke, Bjug Borgundvaag, Robert G. Maunder, Susan Evans, William J Lancee, Clare Pain, Jocelyn P. Bennett, Linda McGillis Hall, Kenneth E. Balderson, Christopher M.B. Fernandes, David S. Goldbloom, Mona Gupta, Jonathan J. Hunter, Lynn M. Nagle, Sonia S. Peczeniuk, Glenna Raymond, Nancy Read, Rosalie J. Steinberg, Susan VanDeVelde Coke, Georgina G. Veldhorst, Donald A. Wasylenki Description An account of the resource Healthcare workers (HCWs) found the 2003 outbreak of severe acute respiratory syndrome (SARS) to be stressful, but the long-term impact is not known. From 13 to 26 months after the SARS outbreak, 769 HCWs at 9 Toronto hospitals that treated SARS patients and 4 Hamilton hospitals that did not treat SARS patients completed a survey of several adverse outcomes. Toronto HCWs reported significantly higher levels of burnout (p = 0.019), psychological distress (p Date A point or period of time associated with an event in the lifecycle of the resource 2006 Subject The topic of the resource stress, research, Burnout, Health personnel, professional, severe acute respiratory syndrome Identifier An unambiguous reference to the resource within a given context DOI: 10.3201/eid1212.060584 Source A related resource from which the described resource is derived Emerging Infectious Diseases Publisher An entity responsible for making the resource available Centers for Disease Control and Prevention Coverage The spatial or temporal topic of the resource, the spatial applicability of the resource, or the jurisdiction under which the resource is relevant Infectious and parasitic diseases, Medicine